species:   Drmel
pid:       MI0028922
parent:    dme-mir-9373
paralog:   
locus:     NT_033777.3:19621080-19621138
matures:   ['AGUUUGUGAGGAGCGUUCGGC', 'CCAUCGCUCUUGGCCAGCUCGU']
srr:       SRR11906543
genome:    /Users/jax/+Genomes/Animal_genomes/Drmel.GCF_000001215.4_Release_6_plus_ISO1_MT_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906543.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906543.cram NT_033777.3:19621080-19621138

0 out of bounds
11 alignments
11 proper strand
10 stranded perfect matches

********************               *********************** 
AGUUUGUGAGGAGCGUUCGGCGGAUACACAUCGCACCCAUCGCUCUUGGCCAGCUCGUC
((((.((.(((((((...((.((((....))).).))...))))))).)).))))....
AGUUUGUGAGGAGCGUUCGGC-------------------------------------- l=21 a=0 c
------------------------------------CCAUCGCUCUUGGCCAGCUCGU- l=22 a=0 c*
-------------------------------------CAUCGCUCUUGGCCAGCUCGU- l=21 a=5 ma
----------------------------------------------------------- l=0 a=0 ma*

-------------------------------------CAUCGCUCUUGGCCAGCUCG-- l=20 a=1 
-------------------------------------CAUCGCUCUUGGCCAGCUCGU- l=21 a=5 (ma)
-------------------------------------CAUCGCUCUUGGCCAGCUCGUC l=22 a=4 
-------------------------------------CAUCGCUCUUGGCCAGCUCGUa l=22 a=1 

mb-00010
ax-0001110
ku-01
ss-111111101110
fn-111
